Appendices: Introduction to Histology for first-time learners

Athena Li and Jennifer Kong

Just like reading, one has to know which perspective for the letters to make sense.  For example, MOM can look like WOW depending on which perspective!

In histology, the same applies – but now consider tissue presented in both 2- and 3 dimensions.

 

In histology, we are looking at two dimensional (2D) sections of  structures that are in 3 dimensions (3D)! This could pose a challenge for us in the sense that structures that can be graphically depicted in its 3D form while being taught to us in an anatomy class can look very different as a section under the microscope. Through the exercise below, we hope to teach you how to think about 3D structures in 2D planes for every scenario. Of course, it could be helpful to keep a note of common cuts of organs, tissues and cells and how that looks under the microscope, but that should all be in the goal of accumulating experience in learning how to think about cuts and planes in histology as it’s impossible for us to anticipate every possible cut of all the structures in our body.

The most common planes used in cutting tissue are divided into horizontal (a.k.a. transverse, axial), sagittal (a.k.a. longitudinal), and frontal (a.k.a. coronal)

a long tube (nephron) is drawn with different cuts along different planes. There are surrounding images to demonstrate what the tube would look like when cut along different planes.
Figure 1 – The cross sectional views of a tube, taken from the sagittal (longitudinal), horizontal (transverse, axial), frontal (coronal), and oblique planes. Image created by Sarah Pinault under a CC BY 4.0 license.

 

Because a 3D tissue specimen, such as a biopsy,  is prepared and sliced into 2D, hollow structures will appear as a mixture of the pattern illustrated in Figure 1.  When looking at hollow structures, the space within, the lumen, will appear differently based on the plane (Figure 2).

 

The frontal view of the abdominal aorta with its branches dominate the image. AT the very top of the image, a cross section of the abdominal aorta is visble with the centra lumen space visible with arrows pointing to the visceral and parietal coverings
Figure 2 – The frontal and cross section view of the abdominal aorta. Note that you can not see the lumen in the frontal view but can see its entire circumference in the cross section.

Figure 2 also represents how “front” and “back” applies when using the anatomical position.  IF there is a structure that is anterior to another structure, then you could say it’s ‘front of” or “anterior to”.  In  Figure 2, this image of the abdominal aorta is anterior to the spine as it is ‘in front of’ the spine in the anatomical position.  Note that ‘front’ and back’ doesn’t apply to tissue where structures can’t be easily recognized in the anatomical position.  For example, a skin biopsy doesn’t have an anterior or posterior perspective as one can’t tell if this biopsy tissue was taken with an identifiable ‘front’ surface.

 

Similarly, determining which way is “up” or “down’ really refers to your point of reference.  As with Figure 2, the abdominal aorta travels “down” in an inferior direction since the anatomical position has the body upright.  However, if you are looking at a biopsy of tissue, there is no “down” as there is not point of reference. Rather, you have “basal” and “apical”  In epithelial tissue, the apical surface faces the external environment or lumen of the tissue and the basal surface faces the basement membrane and deeper structures.  Consider the following analogy of ants walking near two buckets.

There is a blue bucket that is upright and a red bucket that is upside down with not bottom. There are 3 ants positioned: Ant A is between the ground and the blue bucket's bottom. Ant B is between the upside down mouth of the red bucket and the ground. And Ant C is on the rim of the blue bucekt
Figure 3. here are 3 ants positioned near buckets. Ant A is between the ground and the upright blue bucket’s bottom. Ant B is between the ground and the mouth of the upside down red bucket. Ant C is on the rim of the upright blue bucket

Both the blue and red buckets are empty which represent the lumen whereas the ground represents the basement membrane/basal layer.

From Ant A’s perspective, the apical (lumen) surface would be if it looked ‘up’ from the bottom of the bucket, into the empty bucket. Similarly, the basal surface for Ant A would be the ground under its legs.

From Ant B’s perspective, the same goes:  the apical surface is if Ant B looked up into the empty space of the bucket, even though the bucket bottom encloses Ant B.  The basal surface is still the ground under its legs

From Ant C’s perspective, there is no basal surface.    Ant C is perched between two open spaces:  the air above and the empty bucket below.

So let’s apply this to histology in Figures 3 & 4.

Transitional epithelial tissue stained with H&E, making the nuclei of each cell a deep purple, surrounded by cytoplasm of differing shades of pink/purple. The apical surface is highlighted in blue, next to the empty space of the lumen. The basal surface is the bottom of the image as the nuclei of deeper tissue structures is obvious.
Figure 3 – Transitional Epithelial tissue stained with H&E. The apical surface is highlighted in blue, next to the empty space of the lumen. The basal surface is the bottom of the image as the nuclei of deeper tissue structures is obvious.
Pseudostratified Epithelial tissue stained with H&E, making the nuclei of each cell a deep purple, surrounded by cytoplasm of differing shades of pink/purple. The apical surface is highlighted in green and red, next to the empty space of the lumen. The basal surface is the left side of the image as the nuclei of deeper tissue structures is obvious.
Figure 4 Pseudostratified Epithelial tissue stained with H&E, making the nuclei of each cell a deep purple, surrounded by cytoplasm of differing shades of pink/purple. The apical surface is highlighted in green with specialized apical features outlined in red. The apical surface is next to the empty space of the lumen on the right of the image. The basal surface is the left of the image as the nuclei of deeper tissue structures is obvious.

So always look for the luminal space and that helps you identify the apical surface.  Do not assume that apical is always ‘up’ on the image!

 

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Pathology Copyright © 2022 by Athena Li and Jennifer Kong is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License, except where otherwise noted.

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